PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT35883.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 193aa    MW: 20903.7 Da    PI: 10.6946
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT35883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.93.9e-212979256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAaka++aa+++++g+
  PHT35883.1 29 HYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAAKAYDAAAREFRGA 79
                6********.**********8...557*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MAPKEKAGAL AVTAAAAVGK VNGISKEVHY RGVRKRPWGR YAAEIRDPGK KSRVWLGTFD  60
TAEEAAKAYD AAAREFRGAK AKTNFPIVGE EKEENLKIVC KVNNEMINRR SPSQSSTVES  120
SSRDGLASAA VMVDSSPLDL NLSGPIGGFR FQLQNNHNQF RSSPMSGGFS GGGFTANVTN  180
TYLKLKLLRI RIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-28ERF family protein