PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT35969.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ERF

Protein Properties

Length: 481aa MW: 54882.3 Da PI: 4.1821

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT35969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	59.6	7.6e-19	70	127	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpse.ng..kr..krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +g+WvAeIr+p+ g k+ kr +lg+f ta eAa a+++a+k ++g PHT35969.1 70 TYRGVRQRT-WGKWVAEIREPVYfSGeyKStgKRLWLGTFSTASEAAIAYDEAAKVMYG 127 69**999.******777788996679*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MYMSSHIQRK QKRRRNGSDS IEEILLRWKF FYQDVNCIDD QVNKNRRIRV KGSTKGCMRG 60 KGGPENSGCT YRGVRQRTWG KWVAEIREPV YFSGEYKSTG KRLWLGTFST ASEAAIAYDE 120 AAKVMYGSNA ILNFSNYCDV SSKTSSLELS GKSSDDHGDL GVDETQNIEI ESGLKTSDKL 180 DVGVVVNTDL GNCANIDEIS EIHQECCKGN QGSPTCCLTE EELEVIPEEN SEIEVNDECN 240 SGICSTSQNS CVKVETPIVE EMENDEFVHN KDLERLNFND VLNSLLEDKT DVRPTLMFSK 300 DVLRTDEICN STDQIVRQEM DKYSYSMNIS EEQPLDFRSS ENRREDFSNH IEYMERCLME 360 DSSPMEATTI SDAFCLTESY KEAYSFQSFL EESFELNYAE TEKQFDCTYD QQINLQNSET 420 RSQIRSDGII SNQADWKEQN LDVFGLDDFG AGNSWQPGDN IEHLSMFSFD FDISSFINDI 480 D

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MYMSSHIQRK QKRRRNGSDS IEEILLRWKF FYQDVNCIDD QVNKNRRIRV KGSTKGCMRG  60
KGGPENSGCT YRGVRQRTWG KWVAEIREPV YFSGEYKSTG KRLWLGTFST ASEAAIAYDE  120
AAKVMYGSNA ILNFSNYCDV SSKTSSLELS GKSSDDHGDL GVDETQNIEI ESGLKTSDKL  180
DVGVVVNTDL GNCANIDEIS EIHQECCKGN QGSPTCCLTE EELEVIPEEN SEIEVNDECN  240
SGICSTSQNS CVKVETPIVE EMENDEFVHN KDLERLNFND VLNSLLEDKT DVRPTLMFSK  300
DVLRTDEICN STDQIVRQEM DKYSYSMNIS EEQPLDFRSS ENRREDFSNH IEYMERCLME  360
DSSPMEATTI SDAFCLTESY KEAYSFQSFL EESFELNYAE TEKQFDCTYD QQINLQNSET  420
RSQIRSDGII SNQADWKEQN LDVFGLDDFG AGNSWQPGDN IEHLSMFSFD FDISSFINDI  480
D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	8	15	QRKQKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40340.1	2e-31	ERF family protein