PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36003.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 382aa    MW: 42773.6 Da    PI: 6.8861
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.25.5e-31219277259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YY+C+++ gC ++k+ver+++dp+++++tY+ eHnh+
  PHT36003.1 219 SDMWSWRKYGQKPIKGSPYPRGYYKCSTSkGCLARKQVERNRSDPNMFIVTYTAEHNHP 277
                 79************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    
MEEDWDLHAV VRSCTPANTA STTTNDCDLV HGILKVDGAL MKSLRVEKDY RQFDNDQMTL  60
QRGSTTTSCN PTNNIHYLCS FQPRPNDNNN NSLFCFKDLL EQRILTTNSA TDFEESHELC  120
KPFFTTSESL TISSPRRVLP ISPISVLGRL QDLPPSSQQQ QQQHLHQLTN TKPILPKRPL  180
SSLNGSITNC TLHAQSPRTK RRKNQLKKVC QVAADALSSD MWSWRKYGQK PIKGSPYPRG  240
YYKCSTSKGC LARKQVERNR SDPNMFIVTY TAEHNHPMPT HRNSLAGISR HKTANPNKPT  300
SLSPATNSPA PENQESSRDD KEDIFEDDED EFGKTEPDDD FFDGLDELVI QATGDSLPEK  360
FSGTLQFPWL VNNAATTAAG GG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.11e-64WRKY family protein