PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT36005.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 481aa MW: 52962.7 Da PI: 6.2479

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT36005.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.9	1.9e-13	296	341	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr+++P+ +K++Ka+ L Av YI++L PHT36005.1 296 NHVEAERQRREKLNHRFYALRSVVPHV-----TKMDKASLLSDAVAYINEL 341 799*********************8.....8*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MDELIVSSSS SSSSFFIPSL LSQGNQTSST LQQMLQHILK IQTDSWAYAI FWQTSNDDDG 60 RLFLAWGDGH FHVTKVKKGG VVCANKASSV ERKNVIKGLQ ALICENGDNN GVVEGDGDGD 120 VTDAEWFYVM SLAQSFSIGD GVPGKAFSSG SFVWLNGAQQ LEFSNCERAK EAHVHGIETL 180 VCIPTSTGVL ELGSSELIKE NWSLVQQVKT LFNSNQENVN CPIDEKNISL GDIGLQENYN 240 NNTSRKAKAA GETTTIFQDS DQSDSDCQVL MEKPVEKKTP KKRGRKPGAS RETPLNHVEA 300 ERQRREKLNH RFYALRSVVP HVTKMDKASL LSDAVAYINE LKSKVDELKV QLSTKPKKMK 360 IESMDSTNLD NHSTTTTTTS VNQIRPNSSS VASFGIPNNL KVEVEVKILG PDAMIRVQSE 420 NVNYPSARLM RALQDLELHV HHASISSVND LMLQDIVVKV PIGLGTEDGL KIALLRSLEQ 480 Q

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MDELIVSSSS SSSSFFIPSL LSQGNQTSST LQQMLQHILK IQTDSWAYAI FWQTSNDDDG  60
RLFLAWGDGH FHVTKVKKGG VVCANKASSV ERKNVIKGLQ ALICENGDNN GVVEGDGDGD  120
VTDAEWFYVM SLAQSFSIGD GVPGKAFSSG SFVWLNGAQQ LEFSNCERAK EAHVHGIETL  180
VCIPTSTGVL ELGSSELIKE NWSLVQQVKT LFNSNQENVN CPIDEKNISL GDIGLQENYN  240
NNTSRKAKAA GETTTIFQDS DQSDSDCQVL MEKPVEKKTP KKRGRKPGAS RETPLNHVEA  300
ERQRREKLNH RFYALRSVVP HVTKMDKASL LSDAVAYINE LKSKVDELKV QLSTKPKKMK  360
IESMDSTNLD NHSTTTTTTS VNQIRPNSSS VASFGIPNNL KVEVEVKILG PDAMIRVQSE  420
NVNYPSARLM RALQDLELHV HHASISSVND LMLQDIVVKV PIGLGTEDGL KIALLRSLEQ  480
Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	4e-80	bHLH family protein