PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT36117.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 299aa MW: 34490.3 Da PI: 7.1097

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT36117.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	150.3	9.1e-47	11	137	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 pGfrFhPt+eel+ +yLk+kv g+kl++ +vi ++iy+++PwdLp ++ +e+ewyfF++r +k+ +g r+nr+t++g+Wkatg+dk+++ ++ PHT36117.1 11 PGFRFHPTEEELLEFYLKNKVLGRKLRC-DVIGLLNIYSHDPWDLPGLATIGEREWYFFVPRYRKHGSGGRPNRTTQKGFWKATGSDKKIFGLshPRNI 108 9*************************.99***********8777899*********************************976556778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +glkktLvfy+grap+g+ktdWvm+e+rl PHT36117.1 109 IGLKKTLVFYTGRAPRGSKTDWVMNEFRL 137 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MEESAMELDL PGFRFHPTEE ELLEFYLKNK VLGRKLRCDV IGLLNIYSHD PWDLPGLATI 60 GEREWYFFVP RYRKHGSGGR PNRTTQKGFW KATGSDKKIF GLSHPRNIIG LKKTLVFYTG 120 RAPRGSKTDW VMNEFRLPDP FSSPQDIVLC KIYRKATSLK VLEQRAAIEE EIKTAKHVHV 180 SPCSITQPMD NVSFCNEHHE LMDTSITYQS HGFLMSIAKD EVEEDILSVT ENNQYEVSGE 240 VKGKSNYFRP KLLNGQDNLA ELHVPKFSMD FSQDPVWMQL RSPWLDNFSL TPSAFVHNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	4e-99	NAC family protein