PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36127.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 165aa    MW: 18584.2 Da    PI: 10.3244
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-1873122255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+W+AeIrdp+    r +r++lg+f t e+ a+a+++a+ +++g
  PHT36127.1  73 NYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFTTVEDTARAYDRAAIEFRG 122
                 59*******.**********82....48************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MTTTMTSATI TSPSMNMSNF VEPPLFCVPT EPEPCQFCRI NGCLGCNYFG TLAAADNKNN  60
KAKIVALKKK KKNYRGVRQR PWGKWAAEIR DPRRAARVWL GTFTTVEDTA RAYDRAAIEF  120
RGPRAKLNFS FADYTSIQQQ SNNSSSSSPL QVLLQQQQQQ PIQLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.13e-28ERF family protein