PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT36300.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 556aa MW: 61945.3 Da PI: 7.7857

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT36300.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.7	4.5e-09	358	390	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LAk++gL+ +qV++WF N R + PHT36300.1 358 HPYPTDSDKVMLAKRTGLSRNQVSNWFINARVR 390 89*****************************88 PP
2	BELL	86.3	3.4e-28	212	281	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e++ k+ L+s+l+eV+krYkqy++qlq v++sFe v glg+a+p+++ ka+S+hFrcLk ai++q+ PHT36300.1 212 SEHRTNKSNLVSMLDEVYKRYKQYYQQLQGVVASFESVPGLGNAAPFANQSIKALSKHFRCLKKAISDQM 281 68999**************************************************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MAAEGFEAYH VPQQSRRDRL RGGVSDCTVF PSFYNDQSLL NPSDLLLLSH NKQKSLHFMD 60 PQISSSSFQE INNTPPFLYN TQQSTFDPNI TTTHNDNNNN NNSSNNYVST GQGLSLSLSY 120 QPHHQNQLIR TTAAYCNNEL SSKSNSSTIL GPFTGYASIL KGSRFLKPAE QLMEQICDVG 180 NNNKGIYAEK FVEVDDVVVM DLSPDASDDD GSEHRTNKSN LVSMLDEVYK RYKQYYQQLQ 240 GVVASFESVP GLGNAAPFAN QSIKALSKHF RCLKKAISDQ MNYTIKSHSH SSQINCDDST 300 STKLVGKDKL NYNNFQRATA IHNAGFVEHH QPVWRPQRGL PERAVTVLRA WLFDHFLHPY 360 PTDSDKVMLA KRTGLSRNQV SNWFINARVR LWKPMVEEIH MLETRQAHKS ASQRGQNNNN 420 TAEVNFPTSN NSLPSDQNPS TSSAQQFQQV PSKRTRNNDP TDHMNLSYDN VSPRSRVGTD 480 QVSASSGGNG GVSLTLGLHH QNNNGTGIGG LSTDPFPRNA ARRFGIDASN EGFMFGGGFE 540 APNRQFEGQL LHDFVG

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MAAEGFEAYH VPQQSRRDRL RGGVSDCTVF PSFYNDQSLL NPSDLLLLSH NKQKSLHFMD  60
PQISSSSFQE INNTPPFLYN TQQSTFDPNI TTTHNDNNNN NNSSNNYVST GQGLSLSLSY  120
QPHHQNQLIR TTAAYCNNEL SSKSNSSTIL GPFTGYASIL KGSRFLKPAE QLMEQICDVG  180
NNNKGIYAEK FVEVDDVVVM DLSPDASDDD GSEHRTNKSN LVSMLDEVYK RYKQYYQQLQ  240
GVVASFESVP GLGNAAPFAN QSIKALSKHF RCLKKAISDQ MNYTIKSHSH SSQINCDDST  300
STKLVGKDKL NYNNFQRATA IHNAGFVEHH QPVWRPQRGL PERAVTVLRA WLFDHFLHPY  360
PTDSDKVMLA KRTGLSRNQV SNWFINARVR LWKPMVEEIH MLETRQAHKS ASQRGQNNNN  420
TAEVNFPTSN NSLPSDQNPS TSSAQQFQQV PSKRTRNNDP TDHMNLSYDN VSPRSRVGTD  480
QVSASSGGNG GVSLTLGLHH QNNNGTGIGG LSTDPFPRNA ARRFGIDASN EGFMFGGGFE  540
APNRQFEGQL LHDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	7e-92	TALE family protein