PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36304.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 768aa    MW: 86742.8 Da    PI: 6.6796
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36304.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS375.28.6e-1153947661374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+av+++d + a++lL++++ ++sp gd +qRla++f+ +L+arla+++s++ykal  ++ts    ++ l+a++l+   +P+ k+s +t N
  PHT36304.1 394 LRTLLINCAQAVAADDCRSATELLKQIRRHSSPFGDGNQRLAHCFADGLEARLAGTGSQIYKALINKKTS---AADFLKAFHLYLASCPFRKISGFTSN 489
                 6789************************************************************999998...8************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 ++I+  + +++rvHiiDf+i +G+QWp+L+q +a+R++gpp+lRiTg++ p++g   +e++eetg+rL+++A++++vpfe+++ +ak++e+++le+L++
  PHT36304.1 490 KTIMTKARNATRVHIIDFGILYGFQWPTLIQRIAAREGGPPRLRITGIEFPQPGfrPAERIEETGRRLSDYAKSFNVPFEYQA-IAKKWETIRLEDLKL 587
                 *****************************************************9*****************************.7************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E l+Vn+ ++ ++l+de+v  es r+ vL+l+++++P+++++   +  ++++ F++rf e l ++salfd+lea++pre  er+ +Ere++gre+ 
  PHT36304.1 588 EKDEFLVVNCLYRFKNLHDETVLAESSRTLVLNLIREINPDIFIHGIVNGAYSAPFFVTRFREVLFHFSALFDMLEANVPREFPERMLIEREIFGREAL 686
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsek.aakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 nv+aceg er+er et+++W+ rl +a F+++p++++ +++ a   +r+ + + + +++++++++lgWk+r+++++S+W+
  PHT36304.1 687 NVIACEGWERVERPETYKQWQVRLLRARFTQIPFDQQgIMNMAIEKVRTSYHKDFVIDQDNKWMLLGWKGRTIYALSCWT 766
                 **********************************98835666677888888888*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 768 aa     Download sequence    
MDPRFNRFPT SVNGFNLENQ SLLDFSGNWK NKEPIIGAIY PDQILANGPR FENSFVQHNV  60
GGVQSFSNAP SPTSNIALTS KIGTEDDYNE DFDFSDTVLS YINQMLMEED MEDRTHMLQE  120
SLELQAKERS FYEALGKKYP PSPQQNLSIT DQNGEILDDY CSGSLYSCTS NVGSSGGYLI  180
DPRVDSIPND HNSSYEQGIS ICNGTYSSIS SSNSINNLVD GFLDSPVGPL HIPDIYNDSH  240
PIWNFRKGVE EATKFLPTNN KLLDNVIIND LLPQEKRGES GCAATQAEKR DGGGTSLTGS  300
RGRKNAHRDD KDLEEVRSSK QAAVYTESTV RSEEFDVVLL HSMGDGREAL TAYRESLKNA  360
RTKTTAQNGQ SKGFTVGKGG RGKKQSAKKE VIDLRTLLIN CAQAVAADDC RSATELLKQI  420
RRHSSPFGDG NQRLAHCFAD GLEARLAGTG SQIYKALINK KTSAADFLKA FHLYLASCPF  480
RKISGFTSNK TIMTKARNAT RVHIIDFGIL YGFQWPTLIQ RIAAREGGPP RLRITGIEFP  540
QPGFRPAERI EETGRRLSDY AKSFNVPFEY QAIAKKWETI RLEDLKLEKD EFLVVNCLYR  600
FKNLHDETVL AESSRTLVLN LIREINPDIF IHGIVNGAYS APFFVTRFRE VLFHFSALFD  660
MLEANVPREF PERMLIEREI FGREALNVIA CEGWERVERP ETYKQWQVRL LRARFTQIPF  720
DQQGIMNMAI EKVRTSYHKD FVIDQDNKWM LLGWKGRTIY ALSCWTPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein