PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36316.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 115aa    MW: 12564.6 Da    PI: 8.502
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36316.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA39.39.1e-131448133
        GATA  1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkk 33
                C++Cg ++   p+ R+gp g+++LCnaCGl+++ k
  PHT36316.1 14 CRHCGFSSksNPMIRHGPAGPRSLCNACGLMWANK 48
                *****988889*********************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MQQLRYYLLF AKKCRHCGFS SKSNPMIRHG PAGPRSLCNA CGLMWANKFI IGFEALLTLL  60
FPFGILRDLS KVSTIGAQEH CAKSSSEQVI NGSDAMAATG IITSNDENIV LPSEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.17e-21GATA family protein