PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36332.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 309aa    MW: 34149.6 Da    PI: 6.9754
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36332.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.1e-05164186123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C+ C++ F++   L  H+++H
  PHT36332.1 164 YTCTFCKREFKSAQALGGHMNVH 186
                 9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MEDCKSMSTP MNQKENFCKE DGADKVDEGY YRSLIGCLTY LTATRPGTLF VVGSKGEVPP  60
TDSWDYTDLL VDPSEVGALE RRADLLDSHS QLILMGFGSA IPDLGDGKKR TVACSNKYFK  120
HQTMKDFTTT TNNNKNVKEY SWDNINCGDE GDLVGGFLWP PRSYTCTFCK REFKSAQALG  180
GHMNVHRRDR ARLRLQSLSD TIPNPNPNPY PNPSCVSSPS SPSRKFFPPF VPTLPPLLSP  240
TSFSSSTAGV SHGMKNGDLT KMGSAKFEKN GKECSEVVKK GEFLRLDLGI GLISESKDDL  300
DLELRLGYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.16e-28C2H2 family protein