PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT36433.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

FAR1

Protein Properties

Length: 281aa MW: 32667.6 Da PI: 8.0648

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT36433.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.3	7.7e-16	49	134	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Yn+YA GF vrk ++++ +ge+t+r f s+eg++++ + ++++r+r e r++C a++k k + +g wev +++ H+H++ PHT36433.1 49 AYNSYAVARGFGVRKGGKTNN-VKGETTRRLFLFSCEGQSDKLSPF-QERKRQRLEYRCSCMARIKFKIS-NGIWEVCEFNDVHSHPMI 134 5*************98877.8888*********9999888.89999************99.*************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MKDAHADKGK NSSAQEDFSV NEPNICNTSK NFVFEIDIKF NSKEESYNAY NSYAVARGFG 60 VRKGGKTNNV KGETTRRLFL FSCEGQSDKL SPFQERKRQR LEYRCSCMAR IKFKISNGIW 120 EVCEFNDVHS HPMIEDNLKY FIHSGRRLTN ATKNILGSMI NAGIRTKKVV RYLQNEADGV 180 ENVGFIEQDA HNFVQAHKRN MISDGDAQTL INYFMHLQSE DSNFFYSFQV DEDVRLCNFF 240 WRDSTSKLHY EYFGDVMIFD TTYRTNRHDM ICAPFVGVNN R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-37	FAR1 family protein