PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36436.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 261aa    MW: 30056.3 Da    PI: 6.2312
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36436.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM44.35.6e-146102597
         NAM   5 frFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk..kvkaeek.ew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkg 97 
                 +rFhPtde l+ +yL k v  k+ ++ + i+  d+y   +P+++ +  ++  e++ ++ yfF++ ++k+  g+r  r ++  g Wk+   +k+v++  +
  PHT36436.1   6 IRFHPTDEKLI-RYLLKFVCCKNYSC-DNIQLEDLYGNkKPREIFEsnSLGDEDTkKVrYFFTQLKNKKLDGTRFIRtVIGGGLWKELDGEKSVYDGPK 102
                 7**********.99999******999.7899999996549****632333333332336******************8899*************99433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MGLLSIRFHP TDEKLIRYLL KFVCCKNYSC DNIQLEDLYG NKKPREIFES NSLGDEDTKK  60
VRYFFTQLKN KKLDGTRFIR TVIGGGLWKE LDGEKSVYDG PKKTLSCAAL SVRLMYMLVI  120
IRNYVIICLW KDVAAMDAIL PTTQQHGSCL LNQFTSSEHN NAFHELQQDQ NSEQLIKQVQ  180
TIDEIVPSAF HNSCLVYPFT VSDHSAFQLK QDQNIKQVNV VQENNIEETV PFAHYHDDNI  240
TSYPEEGTTN IQTIMLIVIQ H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36160.11e-09NAC family protein