PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36489.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 168aa    MW: 19164.6 Da    PI: 9.6169
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36489.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY30.38.3e-10119141123
                 ---SS-EEEEEEE--TT-SS-EE CS
        WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                 +dDg+ WrKYGqK++ +++fpr+
  PHT36489.1 119 VDDGHGWRKYGQKQILNAKFPRA 141
                 59********************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MESSLLENTI SDLEKVMKEL NRGKKFTRRL REIIKKPKIN VGNEDAYISS AEDLVGKIMN  60
SFCASLSILS SDESTEEVSQ KSMEDSSGSC KTSSLKDRRG CYKRRRTLET SIKETSTLVD  120
DGHGWRKYGQ KQILNAKFPR AEDRNLDKVS LDSPTRYSFS PSNHLRYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-21WRKY family protein