PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36502.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family G2-like
Protein Properties Length: 193aa    MW: 21442.4 Da    PI: 9.9333
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36502.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.24.3e-344498155
     G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                kprl+Wtp+LHerF+eav+qLGG++kAtPk++l+lm+++gLtl+h+kSHLQkYRl
  PHT36502.1 44 KPRLKWTPDLHERFIEAVNQLGGADKATPKSVLKLMGIQGLTLYHLKSHLQKYRL 98
                79****************************************************8 PP
2Myb_DNA-binding64.32.3e-204697148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r++WT++++e++++av+qlGg    t+k++ + mg +g+tl+++ks++qky+
       PHT36502.1 46 RLKWTPDLHERFIEAVNQLGGAdkaTPKSVLKLMGiQGLTLYHLKSHLQKYR 97
                     89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MYHHHHQDNS MHPSTRMSIP ERHLFLQGGN GNGDSGLVLS TDAKPRLKWT PDLHERFIEA  60
VNQLGGADKA TPKSVLKLMG IQGLTLYHLK SHLQKYRLSK NLHGQANASG ANKAVAAAGV  120
ERISENSAAC ISNPSMGPQP NKNIQISEAI QMQIEVQRRL HEQLEVQRHL QLRIEAQGKY  180
LQSVLEKAQE TLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18240.19e-89G2-like family protein