PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT36738.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 555aa MW: 63104.5 Da PI: 6.7344

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT36738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.4	4.3e-10	440	490	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 r+ W+t E ++lv++v ++G g+W+ I +++ +R++ ++k++wq++l PHT36738.1 440 RKYWSTREVLKLVEGVSEYGVGRWNDIKKMFFqssMRRSPVDLKDKWQNLL 490 678*************************99999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MQTAMDPFEY NWSTWNESAT SFQQEPEQVV AAASVYFASE QEAIGVEQLL AEPEYDDIVN 60 TLLDFNTSAF SGVPESYFKE FSALDTILTK TDCGALQRSH NEGDKTKEKF LDGLSNGDDE 120 NHCFISCEDY LLDIELEEDT PTLHDVTRDI SCVESVILEN QLVDSVGRNC GIHVLTLSGA 180 SSSSDHDAMI IDNFDCMSTD KRLMVSREML GHKTPVADNQ WLKPHMIVGL ENQEISEKNF 240 SFPKCSLDSS ENQGANVPPA SCRNLLTVST AFASIFTFRR KPRVQHVKRR EHIQWNSFKC 300 LSSVAGEIQL DCPDKWDSKE SAEENVKCCG MKPGISEQCL KCKPSRRGFG RRYYRRGATV 360 TSQGLGKRNF QVGFDQLIRR ERQLSKDCKA NRAHDDNIHS AEAQNDPSGT LSDQSSDDTS 420 EDDWTIGCET RGTNKDRKHR KYWSTREVLK LVEGVSEYGV GRWNDIKKMF FQSSMRRSPV 480 DLKDKWQNLL RASCRRLQSR RGVDAKMKRR MRSIPRTVLN HVRNLAVIYP YSRQRRSRIS 540 STESLASSNV KSDNH

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MQTAMDPFEY NWSTWNESAT SFQQEPEQVV AAASVYFASE QEAIGVEQLL AEPEYDDIVN  60
TLLDFNTSAF SGVPESYFKE FSALDTILTK TDCGALQRSH NEGDKTKEKF LDGLSNGDDE  120
NHCFISCEDY LLDIELEEDT PTLHDVTRDI SCVESVILEN QLVDSVGRNC GIHVLTLSGA  180
SSSSDHDAMI IDNFDCMSTD KRLMVSREML GHKTPVADNQ WLKPHMIVGL ENQEISEKNF  240
SFPKCSLDSS ENQGANVPPA SCRNLLTVST AFASIFTFRR KPRVQHVKRR EHIQWNSFKC  300
LSSVAGEIQL DCPDKWDSKE SAEENVKCCG MKPGISEQCL KCKPSRRGFG RRYYRRGATV  360
TSQGLGKRNF QVGFDQLIRR ERQLSKDCKA NRAHDDNIHS AEAQNDPSGT LSDQSSDDTS  420
EDDWTIGCET RGTNKDRKHR KYWSTREVLK LVEGVSEYGV GRWNDIKKMF FQSSMRRSPV  480
DLKDKWQNLL RASCRRLQSR RGVDAKMKRR MRSIPRTVLN HVRNLAVIYP YSRQRRSRIS  540
STESLASSNV KSDNH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	523	536	RNLAVIYPYSRQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	4e-18	MYB_related family protein