PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT36772.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 464aa MW: 51603.9 Da PI: 10.041

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT36772.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.7	9.1e-32	194	250	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkvers d++++ei+Y+geHnh+k PHT36772.1 194 DGYNWRKYGQKKVKGSEYPRSYYKCTHLKCPVKKKVERSY-DGQITEIVYRGEHNHPK 250 9*************************************.*************85 PP
2	WRKY	96.6	1.7e-30	383	439	2	58
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 +Dg++WrKYG K+vkgs +prsYYrCts++C+v+k ver+++dp+++++tYeg+Hnh PHT36772.1 383 EDGFRWRKYGHKVVKGSSYPRSYYRCTSPKCSVRKFVERTTDDPRAFITTYEGKHNH 439 7******************************************************** PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MEVNEAAKIP IARPVASRPR CPVYKSFSEL LTGTVDISST NVHSEMAVTA IRPKTIRLKP 60 ATNHALVGEP SSQVGVSEAP VGFGSDNILQ SVEKPKVLYK PIAKLAPRKT IPLLENKGSS 120 VSDQQRVIAD SEAHVQSANE VKQQHDPTTE SKQSLSAKSG QDKKKVCSTI VSGSTEEVAQ 180 SLINTSNVDR PSYDGYNWRK YGQKKVKGSE YPRSYYKCTH LKCPVKKKVE RSYDGQITEI 240 VYRGEHNHPK PQPPKRNLSD GHRRTALCND TSKETNNPAW SNEHPQMSEA YVCRIENQND 300 RRLTIHSSKV PCFYDPIVAA GMHTAVRNSE DSAEGSKKLK ATCDEQKSKR RKIKGPSSGA 360 GTSGESTFPY IPNQSTTDSE ITEDGFRWRK YGHKVVKGSS YPRSYYRCTS PKCSVRKFVE 420 RTTDDPRAFI TTYEGKHNHG VPNRRPNSEA SKTSSKSSAM KEKL

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MEVNEAAKIP IARPVASRPR CPVYKSFSEL LTGTVDISST NVHSEMAVTA IRPKTIRLKP  60
ATNHALVGEP SSQVGVSEAP VGFGSDNILQ SVEKPKVLYK PIAKLAPRKT IPLLENKGSS  120
VSDQQRVIAD SEAHVQSANE VKQQHDPTTE SKQSLSAKSG QDKKKVCSTI VSGSTEEVAQ  180
SLINTSNVDR PSYDGYNWRK YGQKKVKGSE YPRSYYKCTH LKCPVKKKVE RSYDGQITEI  240
VYRGEHNHPK PQPPKRNLSD GHRRTALCND TSKETNNPAW SNEHPQMSEA YVCRIENQND  300
RRLTIHSSKV PCFYDPIVAA GMHTAVRNSE DSAEGSKKLK ATCDEQKSKR RKIKGPSSGA  360
GTSGESTFPY IPNQSTTDSE ITEDGFRWRK YGHKVVKGSS YPRSYYRCTS PKCSVRKFVE  420
RTTDDPRAFI TTYEGKHNHG VPNRRPNSEA SKTSSKSSAM KEKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	4e-87	WRKY family protein