PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36861.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 260aa    MW: 29922.7 Da    PI: 6.5145
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36861.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B395.34e-3013118199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k lt sdv+k++rlv+pk+ ae++       + + e++  l++ede g+ W+++++y+++s++yvltkGW++Fvk+++L++gD+v+F++++ +  + 
  PHT36861.1  13 FEKPLTLSDVGKLNRLVIPKQNAEKYfplsesiNDSGEKGYLLSFEDELGKLWKFRYSYWNSSQSYVLTKGWSRFVKDKKLESGDVVLFERHRVDFDRQ 111
                 89****************************99944455889*************************************************876677777 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++rk
  PHT36861.1 112 FIGWRRK 118
                 9999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MEEIVESEKV HLFEKPLTLS DVGKLNRLVI PKQNAEKYFP LSESINDSGE KGYLLSFEDE  60
LGKLWKFRYS YWNSSQSYVL TKGWSRFVKD KKLESGDVVL FERHRVDFDR QFIGWRRKND  120
GGGDGGGAGA AEYVYRPSVG GPYQNEFRHA GRGVMHNQTT TNGNNTRRQV RLFGVNLECE  180
VDDSSSWSES STPDGSLSSN HHQQSQDYQG QVGQHYYQYV HNSNPHVVPA ASSYNNYYHN  240
NNMDMDYSRD INQMRYDNQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06250.26e-57B3 family protein