PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT36910.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YA
Protein Properties Length: 203aa    MW: 22583.6 Da    PI: 10.3385
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT36910.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA85.96e-273993258
   CBFB_NFYA  2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                 p++VNaKQy++Il+RR+ Rak e e+kl  k rkp+lh SRh hA+rRpRg gGrF
  PHT36910.1 39 TPIFVNAKQYHGILRRRKLRAK-EMENKL-LKPRKPFLHLSRHLHAMRRPRGGGGRF 93
                7********************9.566999.9*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MSSLSMQSYN VDYQGHFYQC FGQPLGRIML PLNLTSDETP IFVNAKQYHG ILRRRKLRAK  60
EMENKLLKPR KPFLHLSRHL HAMRRPRGGG GRFLNTRMAN GSINNDANGT TKTSNMKCHP  120
TGSQNSDISS FNSPKETTNR MSCNSSEVTS LYSRGSSFGT FPIHNSPSVD AFIDMMNTGH  180
DDILMASKWG SAAAASSCCN LKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.32e-31NF-YA family protein