PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37003.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 243aa MW: 26479.9 Da PI: 7.1468

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	61.7	1.4e-19	72	110	16	55
G2-like 16 eaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +av+qL G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl PHT37003.1 72 RAVAQL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 110 59**.******************************8 PP
2	Myb_DNA-binding	24.1	8.3e-08	72	109	14	48
HHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 14 davkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 +av+qlG + +ktI++ m g+t++++ s++qky+ PHT37003.1 72 RAVAQLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 109 59*****999***********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MREEDSNWFA KWEEELPSPK ELMPLSQTLI TPSLAIAFHI QNPNSPNPRM SPLVHTPPSA 60 EFESNSAELG GRAVAQLGIK NAVPKTIMQL MSVDGLTREN VASHLQKYRL YLKRMQGFSS 120 SSSMSGAGVD PATDHLFASS PVPAHFLHPG RGNSEHYMPF VPVAAIVGHA PQLQQQHRHL 180 GSSPNGQFEV PFLSRQSQQP PVQRMGTSVH SSSPVLPSYV EGLESATTAN GRKVLTLFPT 240 GDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10760.1	1e-67	G2-like family protein