PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT37040.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 398aa    MW: 44455.7 Da    PI: 4.2223
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT37040.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.6e-172775355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                y GVr+++ +g+WvAeI+d +   ++ r +lg++ taeeAa+a+++a+  l+g
  PHT37040.1 27 YVGVRQRP-SGKWVAEIKDTT---QKIRMWLGTYETAEEAARAYDQAAVLLRG 75
                99******.7*********32...35**********************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MEINFQKQQQ TETKFKGRKR SKGSNSYVGV RQRPSGKWVA EIKDTTQKIR MWLGTYETAE  60
EAARAYDQAA VLLRGSTTRT NFSATRVSQD SPLAYRIRNL LNLKKIAKEK SLDDLIDATS  120
STTSVTSSNT SNCSSPVSNC DDQSSNLNVT RLSCDQDIIQ EFQPFDGNSN SMTSFNIIDC  180
MPANCDATMF SYCHSPITSS SAIAQTLSCD QEIIQESTTG VSVTNSNIST CGDPVSSENR  240
ERSNLYETLL SYNNNNNNSS VSSIIPQVES REGSVYADAT PTLEGREVVS DTETVLSCDQ  300
EVTQESQLFD DSNTYKPDFD IDTSSCSSFS RPELSWDFEE WLDIPSKTEM GLTEFEVMKV  360
ERQISASLYA VNGVQDYMEI IHDPYDESLW DHLLSNSW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11723GRKRSKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-23ERF family protein