PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT37085.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 246aa    MW: 28105.2 Da    PI: 7.1302
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT37085.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2163.4e-0585107123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C++C ++F+++  L  H++ H
  PHT37085.1  85 YECHYCYRCFPTSQALGGHQNAH 107
                 99******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MERIERESLH FKNVDTFSQL PITRPVKEKP IRLFGKDFVG GGDSTNTVTT TNMSETIDSN  60
PIFHNGLETN TISHIDKNIE VNRKYECHYC YRCFPTSQAL GGHQNAHKKE RQNDKLAHVQ  120
SSIVHEKNVY AISNRHRLGE AAPRIHHQHS TWTNNISTPP PWFYGNVYDH VNEINPINGS  180
DQLGFWKITP TVHHNNSSTS CSNLGFSNDD LIRTSPMVKI STNCENNFMY EPKGEVQDHV  240
SLDLHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58070.11e-31C2H2 family protein