PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37145.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Nin-like

Protein Properties

Length: 778aa MW: 87225.8 Da PI: 5.3524

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37145.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	51.5	2e-16	538	582	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 +++l+ l+++F +++dAA++Lgv+ ++ KriCRq GI RWP+ k PHT37145.1 538 KVTLQFLKQFFGRNLNDAANCLGVSRSTFKRICRQQGIFRWPRMK 582 7899**************************************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 778 aa Download sequence
MAVDQATEQL QIQEFEESQY PATMESPINL YNLDCYFNLP PSPPFSDLLL SPLWNSSDCN 60 DTGNSVGSAI RRITDDLHFS RDSESYPDGS PGDFGKSLKM SPRSIYVCSI KERICEALRY 120 IDSMGEDILI QFWAPVKVNS RFVLATSEQP FVGGDSTSSI LQYRLISLMY AFSVDGTDDG 180 CIGLPGRVFM TKFPEWTPNV QYYSSKEFPQ LDHALNYNIR GALALPVFEG EICVGVLELV 240 MTSQKINYAP EFDKVCKALE ATNLKSTGTF DQQATWIYNE DFKIAQSEIL ELFLAVCETH 300 KLPLAQTWLP QRHQNAMICG KRFSGLTCVP SFAFYVTDAH MWGFREACLE HHLQDEQGLP 360 GRAFSSLNAC FCADISLFCK SEYPLVHYAR MFGLQSSLTI PVCNNHSEKD TYVLEFFLPH 420 SSTDHKIQLQ IAASILATTK ESLQNSKVIQ WIEPKVEGNF EIIDLSVGKK LRLSPVSELN 480 SQTIDTRHGP ETSQSGHVSK EQDFSMQQSS ECDVALLKAR SDANAENITF SIFEKDGKVT 540 LQFLKQFFGR NLNDAANCLG VSRSTFKRIC RQQGIFRWPR MKKTSTANCF HRITEHVNEA 600 AQMVEGASTR TSLAQDPMPG FGSTSSTNMK NPVHHGLLFK QVQATTFAPG TREMQTDKSN 660 TSVTLSSFGI SIGADKQVPE SRIPSDAALQ NGETATIKAR YGEYFIKFKL PFSSQLAELE 720 NKVSDRLKLK IGTFRIQYQD ADDDWIIIAC NDDLESCLSE RRSLGDKAIK MLVESIDM

Sequence ? help Back to Top

Protein Sequence Length: 778 aa Download sequence

MAVDQATEQL QIQEFEESQY PATMESPINL YNLDCYFNLP PSPPFSDLLL SPLWNSSDCN  60
DTGNSVGSAI RRITDDLHFS RDSESYPDGS PGDFGKSLKM SPRSIYVCSI KERICEALRY  120
IDSMGEDILI QFWAPVKVNS RFVLATSEQP FVGGDSTSSI LQYRLISLMY AFSVDGTDDG  180
CIGLPGRVFM TKFPEWTPNV QYYSSKEFPQ LDHALNYNIR GALALPVFEG EICVGVLELV  240
MTSQKINYAP EFDKVCKALE ATNLKSTGTF DQQATWIYNE DFKIAQSEIL ELFLAVCETH  300
KLPLAQTWLP QRHQNAMICG KRFSGLTCVP SFAFYVTDAH MWGFREACLE HHLQDEQGLP  360
GRAFSSLNAC FCADISLFCK SEYPLVHYAR MFGLQSSLTI PVCNNHSEKD TYVLEFFLPH  420
SSTDHKIQLQ IAASILATTK ESLQNSKVIQ WIEPKVEGNF EIIDLSVGKK LRLSPVSELN  480
SQTIDTRHGP ETSQSGHVSK EQDFSMQQSS ECDVALLKAR SDANAENITF SIFEKDGKVT  540
LQFLKQFFGR NLNDAANCLG VSRSTFKRIC RQQGIFRWPR MKKTSTANCF HRITEHVNEA  600
AQMVEGASTR TSLAQDPMPG FGSTSSTNMK NPVHHGLLFK QVQATTFAPG TREMQTDKSN  660
TSVTLSSFGI SIGADKQVPE SRIPSDAALQ NGETATIKAR YGEYFIKFKL PFSSQLAELE  720
NKVSDRLKLK IGTFRIQYQD ADDDWIIIAC NDDLESCLSE RRSLGDKAIK MLVESIDM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-157	Nin-like family protein