PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT37271.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 361aa    MW: 39271.9 Da    PI: 9.511
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT37271.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.41.1e-12311356655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L+el+P+     +k  + a++L +AveYIk Lq
  PHT37271.1 311 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKGLQ 356
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MDSSEFAKNQ TSSGLLRFRS APSSFLENFI DGVGNNANIS IENKGLGSKF NLGNQLLVSQ  60
NSLDSKVLCA NLPPQYPRQN SSTSSVHVVG SMEGGGGGYR VLGSSSNSNN IHQGGQNKLV  120
GSNLMRQNSS PAGLFSQLNS LNGYATLKGG TGGYRMANGV NGDSSPSSSR LKGHFSFPSV  180
TPSSLGMLSR ISEVDNESSI ATALVDDEKR GDANSEAQLY NMGFPFTSWT DSSQFQQTLI  240
GHKRELDSEE NKQFANAQIE ELGNRPPILS HHLSLPKTPA DIAAMEKLLH FQDTIPCKIR  300
AKRGCATHPR SIAERVRRTR ISERMRKLQE LVPNMDKQTN TADMLDLAVE YIKGLQKQYK  360
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.13e-79bHLH family protein