PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT37399.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 220aa    MW: 24730.9 Da    PI: 10.88
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT37399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM76.94.7e-2478452128
         NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                 k+++++w+fF++ + ++a+g r++r t++gyWkatg+   v+s+ +++ +g k+t+vfykgrap+g+kt+W m+ey++
  PHT37399.1   7 KHDSEQWFFFIPIQDREARGGRPTRLTTHGYWKATGTPGFVYSSsNNRIIGGKRTMVFYKGRAPNGKKTQWKMNEYKA 84 
                 56778********************99***************9877888***************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MAGEVIKHDS EQWFFFIPIQ DREARGGRPT RLTTHGYWKA TGTPGFVYSS SNNRIIGGKR  60
TMVFYKGRAP NGKKTQWKMN EYKATTDDDG KFEFEPQQSH WEALQTGHIS RARGTKSGGP  120
ALKQRDPVVG AASRVRKATP GNHGKKKSID GQAFSPTCNL EDPIMRGVEY GKGRTTRVTQ  180
PHLTFMRGAN STKWRSENPP NIIEIKHKSK QKNPQNASPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44350.18e-36NAC family protein