PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT37494.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 199aa    MW: 21701.1 Da    PI: 5.028
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT37494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.1e-183182155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                + y+G+r++k++g+Wv+eIr+p+    +  r++lg+f tae+Aa a++ a+ +l+g
  PHT37494.1 31 PVYRGIRRRKSSGKWVSEIREPK----SpNRIWLGTFSTAEMAAVAYDVAAIALKG 82
                68*******************93....578**********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MATYGGKNNF IGGSNNDSTA PDNNNYSGRH PVYRGIRRRK SSGKWVSEIR EPKSPNRIWL  60
GTFSTAEMAA VAYDVAAIAL KGRDADLNFP NSAASLPVPA TTSARDIQTA AAAAAAAVGA  120
ATDALLAASA RKEAVNEKGK MENMENESNY YEFMDEDLIF DMPNVLINMA EGMLLSPPRF  180
NMHDDDHNTI AYQNLWNYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.12e-42ERF family protein