PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT37567.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 68aa    MW: 7914.99 Da    PI: 4.8435
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT37567.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.63.3e-09845136
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS- CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRt 36
                     +g+W  eEde+l+ +v+ lG ++W++ a+  g  +g++
       PHT37567.1  8 KGPWLDEEDERLAYVVAILGDRHWDALAKASGnnLGKS 45
                     79****************************99666654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    
MQEEKLRKGP WLDEEDERLA YVVAILGDRH WDALAKASGN NLGKSHIDKI PTTEEKWKKL  60
QIEMDELP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53200.11e-12MYB family protein