PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37699.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ARR-B

Protein Properties

Length: 477aa MW: 54433.2 Da PI: 7.1771

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37699.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	64.9	1.5e-20	157	206	4	54
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 +Wt+ LH++F+eav+ L G+ + Pk+ile+m+v+gLt+ +v+SHLQk R PHT37699.1 157 TEWTEALHAKFMEAVQLL-GEGRCYPKEILEVMNVPGLTRMQVASHLQKCR 206 58**************.9***************************98 PP
2	Myb_DNA-binding	31.9	3e-10	158	205	3	47
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqky 47 WT+ ++ ++ +av++lG g +k I + m+ g+t+ q+ s++qk PHT37699.1 158 EWTEALHAKFMEAVQLLGEGrcYPKEILEVMNvPGLTRMQVASHLQKC 205 6*********************************************97 PP
3	Response_reg	35.1	6.8e-13	14	117	1	105
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 v++vd+++ + +++ +l++ +y +v ++ ++ +a+++l + + +D+++l i ++ ++ll + + + + +vv ++++e +++a++ Ga PHT37699.1 14 VVLVDEDKEFVNNMVDLLKSYDY-KVMVVGTALDAMAMLSKGKqkIDVMILNIHSSNTLSFHLLARVVALD--IISLVVWDEQNELVVKKAFDEGAY 107 789******************.***********666666******************9988..5556666888899999**** PP EEEESS--HH CS Response_reg 96 dflsKpfdpe 105 +l Kpfd++ PHT37699.1 108 LCLKKPFDKD 117 *****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MAAPYYGMID EVHVVLVDED KEFVNNMVDL LKSYDYKVMV VGTALDAMAM LSKGKQKIDV 60 MILNIHSSNT LSFHLLARVV ALDIISLVVW DEQNELVVKK AFDEGAYLCL KKPFDKDITK 120 YIWQFVVGEK LKREKARKGF ENNKNQMNKI IKRKNCTEWT EALHAKFMEA VQLLGEGRCY 180 PKEILEVMNV PGLTRMQVAS HLQKCRRNDW RSPEERKSLH RPLGQGSSSD FHESRSSFKK 240 FGTMPHLQIK EPNLNCNPNN TQRNSNLSFP NLSTNNTFAR EESPFQQQFY RPQLHVQSPY 300 LSNFNPFSNP FLSIQNTISG GLQQQQQQRS LFGMLYSQGL QGPIIKNTNY RSDVVINSGH 360 HHTQSDYTLN SIVAQGATYS GNGIVSSRNI RNEISNGYNL NVSMDNVTSY SSNATLYDTY 420 VGNVAINGLE EANSNFQQYI SEPNISNMNN PFQKLEPPSA SLHNEQDNDF DQVYYDD

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MAAPYYGMID EVHVVLVDED KEFVNNMVDL LKSYDYKVMV VGTALDAMAM LSKGKQKIDV  60
MILNIHSSNT LSFHLLARVV ALDIISLVVW DEQNELVVKK AFDEGAYLCL KKPFDKDITK  120
YIWQFVVGEK LKREKARKGF ENNKNQMNKI IKRKNCTEWT EALHAKFMEA VQLLGEGRCY  180
PKEILEVMNV PGLTRMQVAS HLQKCRRNDW RSPEERKSLH RPLGQGSSSD FHESRSSFKK  240
FGTMPHLQIK EPNLNCNPNN TQRNSNLSFP NLSTNNTFAR EESPFQQQFY RPQLHVQSPY  300
LSNFNPFSNP FLSIQNTISG GLQQQQQQRS LFGMLYSQGL QGPIIKNTNY RSDVVINSGH  360
HHTQSDYTLN SIVAQGATYS GNGIVSSRNI RNEISNGYNL NVSMDNVTSY SSNATLYDTY  420
VGNVAINGLE EANSNFQQYI SEPNISNMNN PFQKLEPPSA SLHNEQDNDF DQVYYDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	6e-23	ARR-B family protein