PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT37782.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 515aa MW: 57837.8 Da PI: 6.8595

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT37782.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31	6e-10	400	447	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +l+d+v+q+G g+W+ I + +Rt+ ++k++w+++l PHT37782.1 400 WTVSEVRKLIDGVAQYGVGRWSHIKKLYFsssGHRTPVDLKDKWRNLL 447 ************************9999999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
QNSAFRSGLA SLGVWFDEPE TRDDHASITG ALCFDEKRVL RGMERKGALY NIGSSIAPKR 60 ENDINHEVLD LKQSQFEAGK IQAQNDLSTP CEDYLLDIEF AESITNLDYG SSRGLLDPIL 120 ESQIPLPSCD GTDSCGMPYS AGLVAQEAQS QNAMFGLTNS ELHDLSHHKC ESRILVEYNA 180 VKFPTAFNPG DISNVDDVAD FFAEAVSSEK MNDSMIDHSA LTSNGISLMS NPTQNEGQDV 240 NCESFDVHES SVIGPPVTSQ VINVDTPVTQ KRLRKPTRRY IDESSDLNAR RSRKKTEVST 300 SAPESKNKFL KVRCQKKSRA ESMEMELFSE ESSYKAIQVP FASLVNEECD ERPASNAIQV 360 FKPHKEEIHK EPMVVNPKDD AVAPKKLDQD GARRKHHRLW TVSEVRKLID GVAQYGVGRW 420 SHIKKLYFSS SGHRTPVDLK DKWRNLLKAC YLQKQSKITE KGKHNLSWRP LPKSVLHRVS 480 ELANMHPYPR NRRCESSRSP CASSSPEHFN NTNIQ

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

QNSAFRSGLA SLGVWFDEPE TRDDHASITG ALCFDEKRVL RGMERKGALY NIGSSIAPKR  60
ENDINHEVLD LKQSQFEAGK IQAQNDLSTP CEDYLLDIEF AESITNLDYG SSRGLLDPIL  120
ESQIPLPSCD GTDSCGMPYS AGLVAQEAQS QNAMFGLTNS ELHDLSHHKC ESRILVEYNA  180
VKFPTAFNPG DISNVDDVAD FFAEAVSSEK MNDSMIDHSA LTSNGISLMS NPTQNEGQDV  240
NCESFDVHES SVIGPPVTSQ VINVDTPVTQ KRLRKPTRRY IDESSDLNAR RSRKKTEVST  300
SAPESKNKFL KVRCQKKSRA ESMEMELFSE ESSYKAIQVP FASLVNEECD ERPASNAIQV  360
FKPHKEEIHK EPMVVNPKDD AVAPKKLDQD GARRKHHRLW TVSEVRKLID GVAQYGVGRW  420
SHIKKLYFSS SGHRTPVDLK DKWRNLLKAC YLQKQSKITE KGKHNLSWRP LPKSVLHRVS  480
ELANMHPYPR NRRCESSRSP CASSSPEHFN NTNIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	4e-26	MYB_related family protein