PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT37857.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 771aa    MW: 87373.2 Da    PI: 5.5025
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT37857.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS367.51.8e-1123977681373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lLl+cA+av+++d + a++lL++++++++p gd +qRla++f+ +L+arla+++s++ykal  ++ts    ++ l+a++l+   sP+ k+s ++ N
  PHT37857.1 397 LRTLLLNCAQAVAADDYRTANELLKQIRQHSTPFGDGNQRLAHCFADGLEARLAGTGSQIYKALVNKRTS---AADLLKAYHLYLASSPFSKISSFASN 492
                 6789************************************************************999998...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 + I+  +e+++rvH+iDf+i +G+QWp+++q +a+R++gpp+lRiTg++ p++g   +e++eetg+rLa++A++++vpfe+++ +ak++e++++e+L++
  PHT37857.1 493 RSIMIKAENATRVHVIDFGILYGFQWPTFIQRIAEREGGPPKLRITGIEFPQPGfrPAERIEETGRRLADYAQSFNVPFEYHA-IAKKWETITVEDLNL 590
                 *****************************************************9*****************************.7************** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                  ++E laVn+ ++ ++l+de+v+++s r+ vL+l+++++P+++++   +  ++++ F++rf eal ++salfd+le+ +pre  er  +Ere++gre+ 
  PHT37857.1 591 GKDEFLAVNCLYRFKNLHDETVKVDSSRTVVLNLIREINPDIFIHGVVNGAYSAPFFVTRFREALFHFSALFDMLETIVPREIPERGLIEREIFGREAL 689
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsek.aakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 nv+aceg er+er et+++W++r+  a F++++++ +  ++ a   +r  + + + ++e+s++l+lgWk+r+++++S+W
  PHT37857.1 690 NVIACEGWERVERPETYKQWQARILGARFTQIAFDREeFVNRAVEKVRLGYHRDFIIDEDSQWLLLGWKGRTVYAISCW 768
                 *********************************986515677888888888888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 771 aa     Download sequence    
MFGFTNLVEM DPRFNDHPSS LSNFRLGNQY LPISLDQRMR NGPRCGLICS DQMLLNGPRF  60
ENSFVQHNLG AVGVISGDRL PTNVESRTNL GAEDDFNEDI DFSDAVLSYI NRMLMEEDME  120
DKTDMLQESL ELQAKEKIFY EALGTKNPPS PHQNLFTDRN SESPDDYVAG SIYNSTSNTI  180
DSSSYLVDSR AVNISKDYNS SCFKVPSFHD TSYSSVCSSN SGNIVDGFLD SPVCSFHIPD  240
IYDESRSMWN FHKGVEEASK FLPTSNKLLN SVDINNLPPR ELKTQAAYAA AQVEEKDEGE  300
ASPTEARGKK NPQRDDNHIE EERCGKQAAV FTESTLRSEE FDIVLLHSMG KGEEALEDYR  360
QDLRNAKCIN TVQISKGSKG GKGRGKKQGR KKEVIDLRTL LLNCAQAVAA DDYRTANELL  420
KQIRQHSTPF GDGNQRLAHC FADGLEARLA GTGSQIYKAL VNKRTSAADL LKAYHLYLAS  480
SPFSKISSFA SNRSIMIKAE NATRVHVIDF GILYGFQWPT FIQRIAEREG GPPKLRITGI  540
EFPQPGFRPA ERIEETGRRL ADYAQSFNVP FEYHAIAKKW ETITVEDLNL GKDEFLAVNC  600
LYRFKNLHDE TVKVDSSRTV VLNLIREINP DIFIHGVVNG AYSAPFFVTR FREALFHFSA  660
LFDMLETIVP REIPERGLIE REIFGREALN VIACEGWERV ERPETYKQWQ ARILGARFTQ  720
IAFDREEFVN RAVEKVRLGY HRDFIIDEDS QWLLLGWKGR TVYAISCWIP V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein