PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT37950.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 289aa    MW: 32609.4 Da    PI: 4.7878
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT37950.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.59.8e-32126182258
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                 dDgy+WrKYGqK++k+s++prsYY+Ct ++C +kk+vers+++p++++itYeg H h
  PHT37950.1 126 DDGYKWRKYGQKSIKNSPYPRSYYKCTNPRCGAKKQVERSSNEPDTFIITYEGLHLH 182
                 8******************************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MLIMEEEGLI KNSWSYEDEL IKELLDDESP FLLAPHEEYY STSSSETSYS LDVTKSSISS  60
LSKGSFIDDI ESDLSMTRNG VQSHDVSHDA RNIGLERGLN LMMNKQEALE NKYTLRIKTC  120
GNAMADDGYK WRKYGQKSIK NSPYPRSYYK CTNPRCGAKK QVERSSNEPD TFIITYEGLH  180
LHFAYPFITL NPPQFLDQPT KKPKLTNPKA QNNEENASEV DESPKFVNPS PIVDLEDGLG  240
FGEMGSKGLL EDMVPLMIRN PFIKPTNSYS SSCSYSSPPT SPSFSWSNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.11e-40WRKY family protein