PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT38216.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 92aa MW: 10255.9 Da PI: 10.3021

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT38216.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	85.1	7.1e-27	23	73	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k+rl+Wt+eLH+ F +av+qLGG+e+AtPk il++m+++gLt+ hvkSHLQ PHT38216.1 23 KERLKWTQELHDLFEKAVSQLGGPERATPKGILKVMGIPGLTIFHVKSHLQ 73 68************************************************* PP
2	Myb_DNA-binding	52	1.6e-16	25	73	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r++WT+e+++l+ +av qlGg+ t+k I + mg g+t ++ks++q PHT38216.1 25 RLKWTQELHDLFEKAVSQLGGPeraTPKGILKVMGiPGLTIFHVKSHLQ 73 89**********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 92 aa Download sequence
MPEKFRELPS SNMASNRSDC SSKERLKWTQ ELHDLFEKAV SQLGGPERAT PKGILKVMGI 60 PGLTIFHVKS HLQLASPKGK AYLKFCQTSA LQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	8e-25	G2-like family protein