PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT38460.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 265aa    MW: 30280.8 Da    PI: 4.946
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT38460.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.72.8e-101862343383
                 -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
          B3  33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                 + tl++ede +++We+ l    + +++++++GW  Fv ++gL++gD++ ++
  PHT38460.1 186 PATLRVEDELNKVWEMDL--VERNEGMYISRGWYIFVIEKGLQVGDTIKIY 234
                 5689**************..777777889******************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MRQVVVRVVK ISIENLNGFA DVFLLSKTLI RLSLDRVDSI PPLCIQGNSV EESSSLIPFR  60
NNFVLESGNV IFEVVFLQEW LVENVREVRI GAPNSFQSKR FSMIRRMFGQ TDQRGQWLEW  120
LLEFHIFQES RSTKMAAEQG LGEVVICKTL MEGDVNSWGK GLKVVKDELD NTNAPGRSLN  180
PVLAVPATLR VEDELNKVWE MDLVERNEGM YISRGWYIFV IEKGLQVGDT IKIYRKLPVI  240
PIINADYNIR IERNEASSTD SNEVS