PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT38465.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 219aa    MW: 24710.6 Da    PI: 6.1381
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT38465.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.41.1e-1095139347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+ E+  ++++  ++G g+Wk+I+r+   +Rt+ q+ s+ qky
       PHT38465.1  95 SWTELEHRSFLRGLDKYGRGDWKSISRYCVITRTPTQVASHSQKY 139
                      6***************************9989***********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MRTDRTCNSS FWTKEEDKIF EITLAIYFKD NNLLRRMVEE LPGKLGDDII NYYNILLEDV  60
EAIDSGRVPI PNYPELQSIS NQNSEADVER QRGASWTELE HRSFLRGLDK YGRGDWKSIS  120
RYCVITRTPT QVASHSQKYF KHLKAVPKKN RRASILDITS ADAEAAGTSQ AMPSTNNESI  180
FPRQSTNAEQ IIAVAGRVPS GHDASFANAM DSMYPDVNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.12e-45MYB family protein