PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT38513.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 212aa    MW: 24371.1 Da    PI: 9.9194
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT38513.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.73.3e-114193155
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                +++ h  +Er RR+++ +  + Lr+l+P  +   ++K s ++  + Av+YIk+Lq
  PHT38513.1 41 KKVVHRNVERHRRKEMANLVNSLRSLIPIEF--IKGKRSASDHMQVAVNYIKHLQ 93
                6788*************************65..*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MPCQFQTSCD RPYKSPIGTK ITNLDRNNKE GLTRNESNKL KKVVHRNVER HRRKEMANLV  60
NSLRSLIPIE FIKGKRSASD HMQVAVNYIK HLQKNIQELD NTRKNIKNII SLDDQNKSST  120
NITFQKNNIC VTVNKCEDGM EILINVNNSH KEEIFSLSKV LRWLLEEGLN VVSCVNSKQD  180
EWSLIMIQCQ VNNISSGLTL VGLQKKLIDL IN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.18e-30bHLH family protein