PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT38520.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YB
Protein Properties Length: 142aa    MW: 16286.3 Da    PI: 6.2796
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT38520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB174.51.1e-5420115297
       NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                 +eqdr+lPia v+rimk++lP+nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++wal++lGf+dy+eplk yl++yrelegek
  PHT38520.1  20 KEQDRLLPIAKVGRIMKHILPQNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALGNLGFDDYAEPLKRYLHRYRELEGEK 115
                 89********************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MVDRNNVLRS IDSSEEGGIK EQDRLLPIAK VGRIMKHILP QNAKISKEAK ETMQECVSEF  60
ISFVTGEASD KCHKEKRKTV NGDDICWALG NLGFDDYAEP LKRYLHRYRE LEGEKANQNK  120
AATREEREID ELRNLQGSFY GP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.19e-64NF-YB family protein