PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT38577.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 189aa    MW: 21153 Da    PI: 10.3017
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT38577.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.94.8e-0842642346
                     -HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
                     +W+ Ia+ +  gRt++++k++w++
       PHT38577.1 42 RWSIIAAQLS-GRTDNDVKNHWNT 64
                     7*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MMDITFKEGQ RALAKSKKSK RRVWRSTGGT CMPHAAACGL SRWSIIAAQL SGRTDNDVKN  60
HWNTKLKKKL CCMGIDPVTH KPFSHLISEI TTTLSPPQVP HLAEATLGCF KNEMLHLLTK  120
KRIGFQFHQQ FSNMTNSPNN APSTSQVKNE ENNNYKDDTI EKTEYGLSRA IKKSDKNWET  180
NGGASTSNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.18e-47MYB family protein