PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT38836.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 235aa    MW: 27469.3 Da    PI: 9.2453
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT38836.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.15.8e-0780126455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h + Er RR++ ++++  L +llP       +K +K +i++ A++ I +Lq
  PHT38836.1  80 KHMIKERIRREKQKQSYLALHKLLPMG-----TKGEKNAIVQTATRRIEELQ 126
                 68999********************97.....7*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MEEFFQISWF CDDETYNNFE VNRSAFVSFE SKLSEEFGVY SYGSVSMNHR NMNKRVMEFL  60
KKNWISKNGQ VKMEKKKGHK HMIKERIRRE KQKQSYLALH KLLPMGTKGE KNAIVQTATR  120
RIEELQKYKE NLKKRNDELE MMILAENDSN NEDFDKAKIK TKVNNPISGI DSMLEVLKCL  180
KNCGAKANSI QSSFSLQEFS TIIEIETKSG AGEIEKAVQN TLFEAERNFG AHWYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.14e-44bHLH family protein