PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT38839.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 224aa    MW: 25671.1 Da    PI: 8.3216
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT38839.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.97.7e-0881127455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h + Er RR++ +++++ L +llP       +K++K +i++ A + I +Lq
  PHT38839.1  81 KHMIKERIRRENQKQSYSALHKLLPMG-----TKVEKNAIVQTAARRIEELQ 127
                 68999********************97.....8*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MEEFFQVSNW FCDDETNNNF VVNQSAFVNF ESKLSEGFGV YSCGNVSTNH RNMNKRAMEF  60
LKKNWISKNG QVKIEKEKGH KHMIKERIRR ENQKQSYSAL HKLLPMGTKV EKNAIVQTAA  120
RRIEELQKYK ENLKKRNDEL EMMILAENDS NKNEEEFEMA KIKAKVNNPI SGIDSMLEVL  180
KCLKNCGAKA NSIQSSFSHQ EFSTIIEIET KGSSSDAGEP PPVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.12e-40bHLH family protein