PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT38862.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 127aa    MW: 14459.6 Da    PI: 9.2045
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT38862.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.63.4e-1628108387
                 EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                   +++++  ++  ++lp +fa+++g++k++  +++l+de  r W+v l   + +  + +t+GW +F  +ngL +gD   F+l+++
  PHT38862.1  28 VSTIKPYCIRKTEFYLPMDFATSNGLNKQC--EMILKDEAERCWSVWL--GRLGTNFGITRGWTKFRTENGLLVGDAYKFELIKN 108
                 5567899999999**************877..7***************..999999*************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MKKPSNMSPL NAQVSTSASG DDDHPYFVST IKPYCIRKTE FYLPMDFATS NGLNKQCEMI  60
LKDEAERCWS VWLGRLGTNF GITRGWTKFR TENGLLVGDA YKFELIKNGE IPIAHFHCKY  120
SAKVAKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.14e-16B3 family protein