PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT38863.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 301aa    MW: 35604.3 Da    PI: 4.0755
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT38863.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.12.7e-1223951899
                --HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 18 lpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                +p  f+ ++ +g+  e++t  +  ++g++W+v++  ++++   + +++W +Fv++ +L++g  +vF+++g++ef   +++f++
  PHT38863.1 23 IPIGFL-KYlKGQ--EHVTCAVLKRDGKKWRVQV--NGRK---LEEGNWGKFVEEFDLQVGNLLVFSHEGNMEF--EISIFDS 95
                888999.554777..7889***************..7776...77999*********************99999..8888876 PP
2B347.14.4e-152082831388
                 TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
          B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrs 88 
                 ++ l lp +fa ++g+ ++ + +l++ de+ rsW++k + + ++++  ++++GW++F  +n +kegD + F+++ + 
  PHT38863.1 208 RSTLFLPQQFALANGLTNK-KCKLIISDERQRSWKLKTCSSSNPRArAYIRNGWRKFIAENCIKEGDRIKFEVVTNG 283
                 56799*********88864.459999************8855555559************************77643 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MIILTLPRPI WDKTNFFVLL WKIPIGFLKY LKGQEHVTCA VLKRDGKKWR VQVNGRKLEE  60
GNWGKFVEEF DLQVGNLLVF SHEGNMEFEI SIFDSSQCSR AEYMQEDVVK DEVEVDEEEE  120
EEEEYEVEEE EDEYEVEEEE ENEYEEDEDE DEEEEAKEVA IDDNEEENEY EEDEDKDEEE  180
EAKEVAIDDN SCERSHFECT IGKFCLFRST LFLPQQFALA NGLTNKKCKL IISDERQRSW  240
KLKTCSSSNP RARAYIRNGW RKFIAENCIK EGDRIKFEVV TNGKTPIWKF QVVTDGETPM  300
R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.16e-14B3 family protein