PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39008.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 141aa    MW: 15910.8 Da    PI: 8.817
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.2e-191062256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr++  +g+++AeIrdp++   +   r +lg+f+taeeAa+a+++a+ +l+g+
  PHT39008.1 10 KYRGVRRRT-WGKFAAEIRDPTT---KpsSRQWLGTFDTAEEAARAYDKAAFNLKGH 62
                8*****877.**********976...24499***********************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MQVEKEETIK YRGVRRRTWG KFAAEIRDPT TKPSSRQWLG TFDTAEEAAR AYDKAAFNLK  60
GHLATLNFPN EYYNKLPCPP LYHRNTICPS TNNVNSNTPR GNSSSSSSSS KATEIIEIEC  120
LDNSVLEELL GAEDPKITKR K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.16e-30ERF family protein