PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39179.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 288aa    MW: 31956.4 Da    PI: 9.88
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39179.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.11.2e-0996140250
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaar 50 
                 +y GVr     g++ AeIrd   +   r++ +lg+f+ +e+Aa+a+   r
  PHT39179.1  96 HYGGVRKTL-CGKYTAEIRDlS-Q---RRSSWLGTFDMPEKAARAYAVVR 140
                 689**9666.8*********44.2...5******************8776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MSFRLAELVE CLYTCCFLLT THSAALLVEC TRSASSSARV AKFFELLGRS KAGMISMMSL  60
NHQTKVDGAA TPLTKGRGFY PGYGGGRQRF SRDEVHYGGV RKTLCGKYTA EIRDLSQRRS  120
SWLGTFDMPE KAARAYAVVR QFRGYKVVTN FPEITFKTPK IFSRSLFLSI RETASPPHHK  180
TSVVSGACHI ANGERRAEPS QAYVAICLCG DATFERRRDN MAPKRKEIKS TPSKGTNAAA  240
QLHPPLYELA LQALSQLGVE DNEHREEESF KGDDPNANSS LSKSWSKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-16ERF family protein