PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39236.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 386aa    MW: 42911.1 Da    PI: 9.4653
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39236.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.8e-19217265355
         AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+g
  PHT39236.1 217 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAFAYDTAAYLLRG 265
                 8******9.**********955...5**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MENQSLKSKS FVQKELPTCY KQVAIESLSR FLGDLNHDEI SINSSTNFHQ NGSLSLSSPS  60
TTTSCTQHHQ GNNNNIIPLN NFLESFHNNQ TCSSSSPTLG LFLPEPSILE ISKKAAKSLS  120
NKSHHKSSPA MLFPMSSSLG HEGQIHYQEA PTPNSTTSWL KMNQTLTNCT STKGFSDYWL  180
STTKTQPMKF TGSSRKSSYI QKSSSSSSVI ASQGKLFRGV RQRHWGKWVA EIRLPRNRTR  240
VWLGTFDTAE EAAFAYDTAA YLLRGDYAHL NFPHLKNQLK ANSINGSTAS LLEAKIRAIS  300
AQSKKTDNNN IIDRDDIIIS PKGLSNENST IKSAITQNQE SEKLMEINNK VVKNINQENI  360
DGVQLSRMPS LDMDMIWDAL LISDSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.12e-52ERF family protein