PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT39270.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 295aa MW: 34099.6 Da PI: 6.061

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT39270.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.5	2e-12	96	147	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r+ h e+Er+RR+++N ++ L++l+P++ + ++ + a+i+ A+e++++L+ PHT39270.1 96 QRMIHIEVERNRRKQMNAHLHVLKSLMPSS---YVQRGDQASIVGGAIEFVRELE 147 6999************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MEKKENNQPS MPTIYDNYYS LNEDPYCHNH QHTPMVDEEV ALMVPQKEDK FKEEINASSQ 60 VSFHGDNVEN RKANESKKKK RKRITRIKSS EEVENQRMIH IEVERNRRKQ MNAHLHVLKS 120 LMPSSYVQRG DQASIVGGAI EFVRELEQLL QCLESQKRRK LNGDDEYSSL MDIQDPQLLF 180 APNNNLPLTN ENEIEMQEDR AEIKSCLADV EVKIIGFDNA IIKILSKRRP GQLINTISAL 240 QDLQLNIIHT NVTTIEETVL YSFNVKICGE TRFTADNIAN LVQQIFSFFH ANSPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	77	82	KKKKRK
2	77	83	KKKKRKR
3	97	108	RMIHIEVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	8e-75	bHLH family protein