PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39567.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 281aa    MW: 31932.5 Da    PI: 8.6186
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39567.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.23.5e-28133193259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 dDgy+WrKYGqK++ g+++prsYYrCt++   +C+++k+v+rs++d +v eitY+g+Hn++
  PHT39567.1 133 DDGYSWRKYGQKHILGAKYPRSYYRCTYShmqNCWATKQVQRSDDDATVYEITYRGSHNCR 193
                 8**************************98889***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDCSFNWQYK TLINELTRGI EHAKQLKAYL SSVASTSENQ ELLLQKILSS YEQSLVILKR  60
TGSTVHSSKP LPPTCGAIES SVSVDGSPKS DDKKRCFKEH QELIDISKKR KSQLTRTEQV  120
KVSAESGFEG PTDDGYSWRK YGQKHILGAK YPRSYYRCTY SHMQNCWATK QVQRSDDDAT  180
VYEITYRGSH NCRQATNRAS LEKQELKKQA VYQTGQQYSN QALMNSRANL KVDPDDLDKN  240
ETACPFSFPP IFSGLTDENR HFQISDVDDN RTTSQSQAAA R
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
193111KKRCFKEHQELIDISKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.12e-58WRKY family protein