PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39569.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 307aa    MW: 34595.4 Da    PI: 8.4245
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39569.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.41.6e-24135196159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDgy+WrKYGq ++ g+ +prsYYrC +    +C ++k+v+rs++d +++ itY++ H+++
  PHT39569.1 135 LDDGYSWRKYGQTKILGAYYPRSYYRCRYWllkSCAATKQVQRSNDDITIFAITYKNIHTCR 196
                 59**************************97788**************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MDCVFTWDYN SLINELTQGM EHTKQLKTYL SSVSSTSEST PNSLLQKILS SYEKSLLILK  60
WTGSTVQSLQ PLPPTGGAIE PPPAASDDRS HNCDDKKRSF KDHTELIDRS NKRKSQPRLT  120
KQFNVRTGSG FEGPLDDGYS WRKYGQTKIL GAYYPRSYYR CRYWLLKSCA ATKQVQRSND  180
DITIFAITYK NIHTCREVTN SALQPKSPEK QANHQTPTVD GYSPSFASPT ATESNYLSVS  240
GSQMNSFGRV HNSNHSESYL SDIEIIQNLY HSDSDRTYTL SANTSTTSSS IEGMDVQWAE  300
FRQVKVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.14e-32WRKY family protein