PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39597.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 202aa    MW: 22092.6 Da    PI: 4.4556
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39597.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.31e-141866255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+G+r ++ +g+Wv+eIr p   gk++r++lg++ t+++Aa+a++ a ++l+g
  PHT39597.1 18 IYRGIR-CR-SGKWVSEIRQP---GKTTRIWLGTYPTPQMAAAAYDVAVLALKG 66
                69***9.55.6*********8...557**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MSDLSPTPKS RTNTKHPIYR GIRCRSGKWV SEIRQPGKTT RIWLGTYPTP QMAAAAYDVA  60
VLALKGCQNV VLNFPNHVDS YPKLPPSPSP TDIQRAAATA AEAMAYRGDD DRSLGSSSGG  120
ATCNEGGSVE FPSSSENYAM QIGSTQMVRD EEEYVDEEAL FDFPSLIVNM AEAMMLSPPR  180
INTFPSEDYS SGEFDGESLW SY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-31ERF family protein