PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39599.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 246aa    MW: 27671.8 Da    PI: 4.9055
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39599.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-1864114256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr++  +++Wv+eIr+pse   +kr++lg++ t+e+Aa+a++  +++l+g+
  PHT39599.1  64 IYRGVRRRN-NNKWVCEIREPSE---QKRIWLGTYPTPEMAARAHDVVALALRGN 114
                 69****887.8*********976...5*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MNNNNNNNLI SCFSDSSMAN LERDHSQEIS SSSSEKSGGG LLLAANRPKK RAGRKKFKET  60
RHPIYRGVRR RNNNKWVCEI REPSEQKRIW LGTYPTPEMA ARAHDVVALA LRGNLAILNF  120
EDSSWRLSVP VSKDPKELRQ AAMIAANAFH QDSDESVGVD YMNQEINSND VVVDGASGSD  180
NNIQNMNILC CNNWGENNEM LEIEGLSWQE KMAEGLLFSP TPRLGSCFSW DDVESDVEVS  240
LWSYDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.15e-55ERF family protein