PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39601.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 212aa    MW: 24068.1 Da    PI: 7.438
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39601.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-1850100256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr++  +++Wv+e+r+pse   +kr++lg++ t+e+Aa+a++ a+++l+g+
  PHT39601.1  50 IYRGVRRRN-NNKWVCELREPSE---QKRIWLGTYPTPEMAARAHDVAALALRGN 100
                 69****887.8*********976...5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MTNNTSSCSS NLSSLSAAAA SNEEGMLLLA SSRPKKRAGR KKFRETRHPI YRGVRRRNNN  60
KWVCELREPS EQKRIWLGTY PTPEMAARAH DVAALALRGN LATLNFADSS WRFPVPVSKD  120
PKDIRLAAVI AAQGCSQDLE LVGVDYMNHQ EVNPISQEVK YLEDNETLEM QDWREKMSEG  180
LLFSPTPRLG SYFSWDDVES DVEVSLWSYN IR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.12e-48ERF family protein