PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT39809.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NF-YA
Protein Properties Length: 124aa    MW: 13721 Da    PI: 9.3445
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT39809.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA461.7e-1468101135
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksr 35 
                 dep++VN KQy++Il+RR+ Rak+e+ekkl  k+r
  PHT39809.1  68 DEPIFVNVKQYHAILRRRHFRAKAESEKKL-LKAR 101
                 79***************************9.6666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MSVPGTVSPN MNYVMPTQLG NRNVMIARSV CHSCSPVALA TIWLKISCSR SANGNSTSCV  60
PLPSDAIDEP IFVNVKQYHA ILRRRHFRAK AESEKKLLKA RMELLDLGET VGTESRGLDY  120
FLVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.12e-11NF-YA family protein